DEVELOPMENT OF RICE LINES (Oryza sativaL.) TOLERANT TO SUBMERGENCE VIA Sub1GENE INTRODUCTION INTO LANDRACES AND ELITE BREEDING LINES

Received: 08-10-2015

Accepted: 11-03-2016

DOI:

Views

6

Downloads

0

Section:

NÔNG HỌC

How to Cite:

Lang, N., Hoa, N., Ha, P., Hieu, N., Huong, N., Buu, B., … Wassmann, R. (2024). DEVELOPMENT OF RICE LINES (Oryza sativaL.) TOLERANT TO SUBMERGENCE VIA Sub1GENE INTRODUCTION INTO LANDRACES AND ELITE BREEDING LINES. Vietnam Journal of Agricultural Sciences, 14(3), 307–320. http://testtapchi.vnua.edu.vn/index.php/vjasvn/article/view/1417

DEVELOPMENT OF RICE LINES (Oryza sativaL.) TOLERANT TO SUBMERGENCE VIA Sub1GENE INTRODUCTION INTO LANDRACES AND ELITE BREEDING LINES

Nguyen Thi Lang (*) 1 , Nguyen Thanh Hoa 1 , Pham Thi Thu Ha 1 , Nguyen Van Hieu 1 , Nguyen Ngoc Huong 1 , Bui Chi Buu 2 , Russell Reinke 3, 4 , Tran Bao Toan 5 , Abdelbagi M Ismail 3 , Reiner Wassmann 3

  • 1 Cuu Long Delta Rice Research Institute (CLRRI), Thoi Lai, Can Tho, Viet Nam
  • 2 Institute of Agricultural Science for Southern Viet Nam (IAS), Viet Nam
  • 3 International RiceResearch Institute, DAPO 7777, Metro Manila, Philippines
  • 4 Temperate Rice Breeder – IRRI andNICS project, Suwon 441-857, Republic of Korea
  • 5 Biotechnology PCR Company, Can Tho, Viet Nam
  • Keywords

    chromosome, molecular markers, submergence tolerance, QTL

    Abstract


    Development of rice genotypes tolerant to complete submergence in the Mekong Delta was carried out for three continuous years by CLUES Project fund. Eighty five high-yielding cultivars and eighty four progenies from backcrossing population (BC3F3) of OM1490/IR64 Sub1were used to study the yield components and submergence tolerance. Phenotyping was implemented at three stages: seedling, tillering and heading. Different segregation ratio and phenotypical variation indicated the complex genetic background. All genotypes have been evaluated under both submergence and non-submergence treatments. Correlation coefficient between the survival rate (%) and tiller number /10 hills was positively significant of 0.8880**. Marker-assisted backcrossing (MAB) was exploited on chromosomes 9 to address ten molecular markers (SSRs). Of them, only three polymorphic SSRs really linked to the target QTLs. Marker-assisted selection helped identify elite lines, which would be breeding materials via three molecular markers on the target region viz. RM3269, RM5304 and RM1367 on chromosome 9. Three selected offspring lines from BC3F3population of OM1490/IR64 Sub1as 26, 38 and 50 exhibited good adaptation to submergence.

    References

    Collard BC, Mackill DJ. 2008. Marker-assisted selection: an approach for precision plant breeding in the twenty-first century. Philosophical

    IRRI. 1996. Standard evaluation system. The International Rice Research Institute, Los Banos, Philippines.

    Ismail AM, Thomson MJ, Singh RK, Gregorio GB, Mackill DJ. 2008. Designing rice varieties adapted to coastal areas of South and Southeast Asia. J Indian Soc Coast Agric Res 26:69-73

    Lang NT, Buu BC. 2011. Rice Science – Genetics & Breeding. Agriculture Publisher HCMC 623 pp.

    Lang NT. 2002. Protocol for Basic Biotechnology Procedures. Agricultural Publisher, Ho Chi Minh City.

    Lang NT. 2012. Improvement of salinity and submergence resilience of locally-adapted rice varieties and elite lines. Annual report: Climate Change Affecting Land Use in the Mekong Delta: Adaptation of Rice-based Cropping Systems (CLUES).

    Lang NT. 2013. Breeding rice varieties with good quality, submerged tolerance, drought tolerance and tolerating to major pests and diseases for An Giang province. General Report on Science and Technology, Agricultural Publishing House.

    Le Anh Tuan. 2009. Impact of climate change on ecosystems and rural development in the Mekong Delta. Forum "Biosphere Reserve and sustainable rural development in the Mekong Delta", Cantho City, 5-6/6/2009.

    Mackill DJ. 2006. Breeding for resistance to abiotic stress in rice: the value of quantitative trait loci. In Plant breeding: the Arnel R. Hallauer International Symposium (eds KR Lamkey & M Lee), pp. 201–212. Ames, IA: Blackwell

    MackillDJ. 2007. Molecular markers and marker-assisted selection in rice. Book_Varshney&Tuberosa_9781402062964_Proof2_July 12, 2007

    Nandi S, Subudhi PK, Senadhira D, Manigbas NL, Sen-Mandi S, Huang N. 1997. Mapping QTLs for submergence tolerance in rice by AFLP analysis and selective genotyping. Molecular and General Genetics

    Tang DQ, Kasai Y, Miyamoto N, Ukai Y, Nemoto K (2005) Comparison of QTLs for early elongation ability between two floating rice cultivars with a different phylogenetic origin. Breed Sci 55:1–5

    Tao NV. 2010. Evaluation of the initial materials for rice breeding tolerant to submergence (Oryza sativa L.) MSc. Thesis. Can Tho University, Agricultural Publishing House Publication.

    Toojinda T, Siangliw M, Tragroonrung S, Vanavichit A. 2003. Molecular genetics of submergence tolerance in rice: QTL analysis of key traits. Annals of Botany 91: 243–253.

    Xu K, Mackill DJ. 1996. A major locus for submergence tolerance mapped on rice chromosome 9. Molecular Breeding 2: 219–224.

    Xu K, Xia X, Fukao T, Canlas P, Maghirang-Rodriguez R, Heuer S, Ismail AI, Bailey-Serres J, Ronald PC, Mackill DJ (2006) Sub1A is an ethylene response factor-like gene that confers submergence tolerance to rice. Nature 442:705-708.