Analysis of GeneticDiversity in Black Rice by SSR Markers

Received: 29-04-2014

Accepted: 18-07-2014

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Issue: Vol. 12 No. 4 (2014)

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NÔNG HỌC

How to Cite:

Tuoi, N., Cuong, P., & Hoan, N. (2024). Analysis of GeneticDiversity in Black Rice by SSR Markers. Vietnam Journal of Agricultural Sciences, 12(4), 485–494. http://testtapchi.vnua.edu.vn/index.php/vjasvn/article/view/123

Analysis of GeneticDiversity in Black Rice by SSR Markers

Ngo Thi Hong Tuoi (*) 1 , Pham Van Cuong 1 , Nguyen Van Hoan 2

  • 1 Khoa Nông học, Học viện Nông nghiệp Việt Nam
  • 2 Dự án JICA-JST- Học viện Nông nghiệp Việt Nam

    • Keywords

    Genetic Diversity, quality rice, SSR markers

    Abstract


    The experiment aimedto analyze the genetic diversity of 46 local accessionsof colored rice including glutinous and non-glutinous rice based on the presence and polymorphismlevelof SSR molecular markers. The experiment used 35 SSR molecular markers, including 9 monomorphic and 26 polymorphic markers witha total of 68 alleles, anaverage of 2.62 alleles per locus. Polymorphic Information Content (PIC) ranged from 0.08 to 0.74 with an average value of 0.46. The rice germplasm was divided into 2 main clusters. In addition, experiments also determined the anthocyanin content of varieties. Sixvarietieswithhighestanthocyanin contentwere N14, N16, N18, N4, N22andN20. The data obtained in this study provide important information for breeding of specialtyriceby molecular markers.

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